To install DIALIGN 2 on your system:
Uncompress and tar the file dialign2_*.tar.Z
( uncompress dialign2_*.tar.Z
tar xvf dialign2_*.tar )
depending on your operating system.
Set the environment variable DIALIGN2_DIR to the directory
your_path/dialign2_dir
where `your_path' is the directory where you have just installed DIALIGN 2
(
setenv DIALIGN2_DIR /your_path/dialign2_dir/ )
This is important for the online user-guide, for the similarity
matrix BLOSUM62, and for two other files employed by the program.
Add the DIALIGN 2 directory (/your_path/dialign2_dir/) to the
environment variable PATH, so that the program can be called from every
other directory.
(
setenv PATH $PATH":/your_path/dialign2_dir" )
To keep these environment variables for your next sessions also, put the
commands into your .cshrc file.
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