Requête HQL : erreur de syntaxe
Bonjour à tous.
J'essaie de récupérer une liste d'objet à partir d'une requête HQL un peu complexe :
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|
select distinct seqDbxref.dbxref from SeqDbxref seqDbxref where (seqDbxref.dbxref.xrefDbname
in ('Swiss-Prot', 'UniProt', 'UniProtKB', 'TrEMBL') AND (seqDbxref.seq.id
in (select proteinHit.seqId from ProticProteinHit proteinHit
where (select msSampleComponents.proticDetectedSpots
from ProticMsSampleComponents msSampleComponents where msSampleComponents
in (select matchSample.proticMsSamples.proticMsSampleComponentses from
ProticMatchSample matchSample where matchSample
in proteinHit.proticMatch.proticMatchSamples))))) |
Mais j'obtiens une erreur de syntaxe que je ne comprends pas :
Code:
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| Error
Mon Apr 26 17:55:30 CEST 2010
org.hibernate.hql.ast.QuerySyntaxException: unexpected AST node: query [
select distinct seqDbxref.dbxref from fr.comp.centre.app.server.dao.go_.SeqDbxref seqDbxref where (seqDbxref.dbxref.xrefDbname in
('Swiss-Prot', 'UniProt', 'UniProtKB', 'TrEMBL') AND (seqDbxref.seq.id in (
select proteinHit.seqId from fr.comp.centre.app.server.dao.ProticProteinHit proteinHit where (
select msSampleComponents.proticDetectedSpots from fr.comp.centre.app.server.dao.ProticMsSampleComponents msSampleComponents where msSampleComponents in (
select matchSample.proticMsSamples.proticMsSampleComponentses from
fr.comp.centre.app.server.dao.ProticMatchSample matchSample where matchSample in proteinHit.proticMatch.proticMatchSamples)))))
]
org.hibernate.hql.ast.QuerySyntaxException: unexpected AST node: query [
select distinct seqDbxref.dbxref from fr.comp.centre.app.server.dao.go_.SeqDbxref seqDbxref where (seqDbxref.dbxref.xrefDbname in
('Swiss-Prot', 'UniProt', 'UniProtKB', 'TrEMBL') AND (seqDbxref.seq.id in (
select proteinHit.seqId from fr.comp.centre.app.server.dao.ProticProteinHit proteinHit where (
select msSampleComponents.proticDetectedSpots from fr.comp.centre.app.server.dao.ProticMsSampleComponents msSampleComponents where msSampleComponents in (
select matchSample.proticMsSamples.proticMsSampleComponentses from
fr.comp.centre.app.server.dao.ProticMatchSample matchSample where matchSample in proteinHit.proticMatch.proticMatchSamples)))))
]
at org.hibernate.hql.ast.QuerySyntaxException.convert(QuerySyntaxException.java:31)
at org.hibernate.hql.ast.QuerySyntaxException.convert(QuerySyntaxException.java:24)
at org.hibernate.hql.ast.ErrorCounter.throwQueryException(ErrorCounter.java:59)
at org.hibernate.hql.ast.QueryTranslatorImpl.analyze(QueryTranslatorImpl.java:235)
at org.hibernate.hql.ast.QueryTranslatorImpl.doCompile(QueryTranslatorImpl.java:160)
at org.hibernate.hql.ast.QueryTranslatorImpl.compile(QueryTranslatorImpl.java:111)
at org.hibernate.engine.query.HQLQueryPlan.<init>(HQLQueryPlan.java:77)
at org.hibernate.engine.query.HQLQueryPlan.<init>(HQLQueryPlan.java:56)
at org.hibernate.engine.query.QueryPlanCache.getHQLQueryPlan(QueryPlanCache.java:72)
at org.hibernate.impl.AbstractSessionImpl.getHQLQueryPlan(AbstractSessionImpl.java:133)
at org.hibernate.impl.AbstractSessionImpl.createQuery(AbstractSessionImpl.java:112)
at org.hibernate.impl.SessionImpl.createQuery(SessionImpl.java:1623)
at org.hibernate.console.HQLQueryPage.setSession(HQLQueryPage.java:106)
at org.hibernate.console.ConsoleConfiguration$4.execute(ConsoleConfiguration.java:519)
at org.hibernate.console.execution.DefaultExecutionContext.execute(DefaultExecutionContext.java:64)
at org.hibernate.console.ConsoleConfiguration.executeHQLQuery(ConsoleConfiguration.java:514)
at org.hibernate.eclipse.hqleditor.HQLEditor.executeQuery(HQLEditor.java:416)
at org.hibernate.eclipse.console.actions.ExecuteQueryAction.execute(ExecuteQueryAction.java:73)
at org.hibernate.eclipse.console.actions.ExecuteQueryAction.run(ExecuteQueryAction.java:53)
at org.eclipse.jface.action.Action.runWithEvent(Action.java:498)
at org.hibernate.eclipse.console.actions.ExecuteQueryAction.runWithEvent(ExecuteQueryAction.java:57)
at org.eclipse.jface.action.ActionContributionItem.handleWidgetSelection(ActionContributionItem.java:584)
at org.eclipse.jface.action.ActionContributionItem.access$2(ActionContributionItem.java:501)
at org.eclipse.jface.action.ActionContributionItem$6.handleEvent(ActionContributionItem.java:452)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1176)
at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3493)
at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3112)
at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2405)
at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2369)
at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2221)
at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:500)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:493)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
at org.eclipse.ui.internal.ide.application.IDEApplication.start(IDEApplication.java:113)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:194)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:368)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:616)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:559)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:514)
at org.eclipse.equinox.launcher.Main.run(Main.java:1311) |
Pourriez-vous m'indiquer une piste pour résoudre ce problème ?
Voici les classes des objets correspondant :
Dbxref.class :
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| public class Dbxref implements java.io.Serializable {
private int id;
private String xrefDbname;
private String xrefKey;
private String xrefKeytype;
private String xrefDesc;
private Set<TermDbxref> termDbxrefs = new HashSet<TermDbxref>(0);
private Set<Evidence> evidences = new HashSet<Evidence>(0);
private Set<EvidenceDbxref> evidenceDbxrefs = new HashSet<EvidenceDbxref>(0);
private Set<GeneProduct> geneProducts = new HashSet<GeneProduct>(0);
private Set<TermDefinition> termDefinitions = new HashSet<TermDefinition>(0);
private Set<SeqDbxref> seqDbxrefs = new HashSet<SeqDbxref>(0);
public Dbxref() {
}
//...
} |
SeqDbxref.class :
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| public class SeqDbxref implements java.io.Serializable {
private SeqDbxrefId id;
private Seq seq;
private Dbxref dbxref;
public SeqDbxref() {
}
//...
} |
Seq.class :
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| public class Seq implements java.io.Serializable {
private int id;
private Integer timestamp;
private String displayId;
private String description;
private String seq;
private Integer seqLen;
private String md5checksum;
private String moltype;
private Set<SeqProperty> seqProperties = new HashSet<SeqProperty>(0);
private Set<SeqDbxref> seqDbxrefs = new HashSet<SeqDbxref>(0);
private Set<GeneProductSeq> geneProductSeqs = new HashSet<GeneProductSeq>(0);
public Seq() {
}
//...
} |
ProticProteinHit.class :
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| public class ProticProteinHit implements java.io.Serializable {
private long proteinHitId;
private ProticProjects proticProjects;
private ProticMatch proticMatch;
private ProticLog proticLog;
private long seqId;
private Integer rank;
private Double score;
private boolean isPrivate;
private Set<ProticProteinHitParam> proticProteinHitParams = new HashSet<ProticProteinHitParam>(0);
private Set<ProteinAnnotQuality> proteinAnnotations = new HashSet<ProteinAnnotQuality>(0);
public ProticProteinHit() {
}
//...
} |
ProticMatch.class :
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| public class ProticMatch implements java.io.Serializable {
private long matchId;
private ProticMsIdentificationRun proticMsIdentificationRun;
private Set<ProticPeptideHit> proticPeptideHits = new HashSet<ProticPeptideHit>(0);
private Set<ProticProteinHit> proticProteinHits = new HashSet<ProticProteinHit>(0);
private Set<ProticMatchSample> proticMatchSamples = new HashSet<ProticMatchSample>(0);
public ProticMatch() {
}
//...
} |
ProticMatchSample.class :
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| public class ProticMatchSample implements java.io.Serializable {
private ProticMatchSampleId id;
private ProticMatch proticMatch;
private ProticMsSamples proticMsSamples;
private String sampleName;
public ProticMatchSample() {
}
//...
} |
ProticMsSamples.class :
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| public class ProticMsSamples implements java.io.Serializable {
private long msSampleId;
private ProticMethods proticMethods;
private ProticProjects proticProjects;
private ProticLog proticLog;
private ProticObsolete proticObsolete;
private ProticLabelingSets proticLabelingSets;
private String sampleName;
private Set<ProticMsSampleSpecies> proticMsSampleSpecieses = new HashSet<ProticMsSampleSpecies>(0);
private Set<ProticMatchSample> proticMatchSamples = new HashSet<ProticMatchSample>(0);
private Set<ProticMsRun> proticMsRuns = new HashSet<ProticMsRun>(0);
private Set<ProticMsSampleComponents> proticMsSampleComponentses = new HashSet<ProticMsSampleComponents>(0);
private Set<ProticMsSampleDescription> proticMsSampleDescriptions = new HashSet<ProticMsSampleDescription>(0);
private Set<ProticWell> proticWells = new HashSet<ProticWell>(0);
private Set<MsSampleAnnotQuality> msSampleAnnotations = new HashSet<MsSampleAnnotQuality>(0);
public ProticMsSamples() {
}
//...
} |
ProticMsSampleComponents.class :
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| public class ProticMsSampleComponents implements java.io.Serializable {
private long msSampleComponentId;
private ProticDetectedSpots proticDetectedSpots;
private ProticProteinSamples proticProteinSamples;
private ProticMsSamples proticMsSamples;
private ProticLabeling proticLabeling;
private String componentName;
private Set<ProticMsSampleComponentQuantities> proticMsSampleComponentQuantitieses = new HashSet<ProticMsSampleComponentQuantities>(
0);
public ProticMsSampleComponents() {
}
//...
} |
ProticDetectedSpots.class :
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| public class ProticDetectedSpots implements java.io.Serializable {
private long detectedSpotId;
private ProticDetections proticDetections;
private ProticMatchedSpots proticMatchedSpots;
private ProticProjects proticProjects;
private ProticLog proticLog;
private ProticObsolete proticObsolete;
private long spotSoftNum;
private String spotManualNum;
private double x;
private double y;
private Double observedMw;
private Double observedPi;
private boolean isPrivate;
private String remark;
private Set<ProticMatchedSpots> proticMatchedSpotses = new HashSet<ProticMatchedSpots>(0);
private Set<ProticMsSampleComponents> proticMsSampleComponentses = new HashSet<ProticMsSampleComponents>(0);
private Set<ProticDetectedSpotQuantitation> proticDetectedSpotQuantitations = new HashSet<ProticDetectedSpotQuantitation>(0);
public ProticDetectedSpots() {
}
//...
} |
Si vous avez besoin d'autres informations, n'hésitez pas à demander.
Merci d'avance.:?
